BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017E04LP1|AL427169
(928 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1486 1791 0.0
>3x_Contig1486
Length = 12131
Score = 1791 bits (901), Expect = 0.0
Identities = 922/929 (99%), Gaps = 2/929 (0%)
Strand = Plus / Plus
Query: 1 tctctctkttgctgcctccaatgcattaatgtatttctgtcaggactgctcgtcacttct 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4441 tctctctgttgctgcctccaatgcattaatgtatttctgtcaggactgctcgtcacttct 4500
Query: 61 tgttaattattgtggccagttagtggattttatttggaaaattgaacgcgcagttgacaa 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4501 tgttaattattgtggccagttagtggatttcatttggaaaattgaacgcgcagttgacaa 4560
Query: 121 ctactctatgtttgagatgtgtcaaggcttaagttctgtcataaatgagcaggaaacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4561 ctactctatgtttgagatgtgtcaaggcttaagttctgtcataaatgagcaggaaacagc 4620
Query: 181 gaagattggtggcatattcaattcattcacctcccaacataataagaggtttgacattat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4621 gaagattggtggcatattcaattcattcacctcccaacataataagaggtttgacattat 4680
Query: 241 cattcagcaattcatctcgaacccatctgatcctgatctttctgcaaaagttgcacacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4681 cattcagcaattcatctcgaacccatctgatcctgatctttctgcaaaagttgcacacta 4740
Query: 301 tattgatttgctttatgcaattttggagaacattgtccccaaattcgagtatccagaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4741 tattgatttgctttatgcaattttggagaacattgtccccaaattcgagtatccagaaca 4800
Query: 361 aggtgttgaagaaccgttaattgcctctatttccgaacatattacaaagttaattaactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4801 aggtgttgaagaaccgttaattgcctctatttccgaacatattacaaagttaattaactt 4860
Query: 421 attggacgcatatgcgatctctaatgttatcattgtcgatagaacaatgaaattcttccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4861 attggacgcatatgcgatctctaatgttatcattgtcgatagaacaatgaaattcttccg 4920
Query: 481 tcgtgttttcgaaaaataccacctattcacacaaccaatacttccggcggtctcagaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4921 tcgtgttttcgaaaaataccacctattcacacaaccaatacttccggcggtctcagaatt 4980
Query: 541 tgtggctaaaggttattcaacaagtggtctaggagcgtatttgtggttctctggttcaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 tgtggctaaaggttattcaacaagtggtctaggagcgtatttgtggttctctggttcaat 5040
Query: 601 tatttacgtttatggtgacgatgaatattatcctgtcgatgtacaggtcaaagaggcagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 tatttacgtttatggtgacgatgaatattatcctgtcgatgtacaggtcaaagaggcagt 5100
Query: 661 gtggcaatttgcctgtcagcaatgttctacattcttcaataattttaagtcaatgcaaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5101 gtggcaatttgcctgtcagcaatgttctacattcttcaataattttaagtcaatgcaaac 5160
Query: 721 attagacaaattctttgaaatggttcacgacttcttccttatgtgtwatgatcttttaat 780
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5161 attagacaaattctttgaaatggttcacgacttcttccttatgtgtaatgatcttttaat 5220
Query: 781 gtttttccctgaacatatgatgaacactcctgtgcttatttcgtccctaatacaatggga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5221 gtttttccctgaacatatgatgaacactcctgtgcttatttcgtccctaatacaatggga 5280
Query: 841 tttagagagt-ytccaaaactcgacaattttgaagcatatatgacattgatcagattttt 899
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5281 tttagagagtcttccaaaactcgacaattttgaagcatatatgacattgatcagattttt 5340
Query: 900 agatgatttatcatctttgggggtycaaa 928
||||||||||||||| |||||||| ||||
Sbjct: 5341 agatgatttatcatc-ttgggggttcaaa 5368
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6989
Number of Sequences: 1807
Number of extensions: 6989
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)